Search for tag: "species"

Population Dynamics of Phage and Bacteria: A New Mathematical Model | Joan Roughgarden, PhD, Stanford Univ. & Univ. of Hawaii

Dr. Joan Roughgarden talks about a new mathematical model developed to understand phage-bacteria dynamics. The follow-up Q&A is included in this video. Penn State’s Microbiome Center…

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Metatranscriptomics; Ready for Prime Time? | Greg Gloor, Ph.D., University of Western Ontario

Metatranscriptomics presents a wickedly hard problem when analyzed by high throughput sequencing because of the many moving parts: the abundance and occurrence of different species can vary along…

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L08f: Getting Started With Orange 05: Hierarchical Clustering

Direct YouTube video link: https://youtu.be/dJ5z2SRwzgs Explanation of distance measurement between data points and a simple use of hierarchical clustering in the Orange workflow. License: GNU…

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L08c: Getting Started with Orange 02: Data Workflows

Direct YouTube video link: https://youtu.be/lb-x36xqJ-E Creating a data analysis workflow in Orange data mining software. License: GNU GPL + CC Music by: http://www.bensound.com/ Website:…

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The influence of Pseudomonas on the Agaricus bisporus fruiting body microbiome and the initiation of bacterial blotch disease

Max Aleman, a PhD candidate in Plant Pathology and Environmental Microbiology, shares a current research project on the metagenome in mushroom blotch disease. Penn State’s Microbiome Center…

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Coral symbionts as models for the impact of symbiosis on genome evolution of intracellular eukaryotes | Raul Gonzalez-Pech, Ph.D.

Join us as Raul Gonzalez-Pech, an Eberly Postdoctoral Fellow, shares his past, current, and future research on the complicated genomic structures of microeukaryotes in coral reefs. Penn…

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Interactions of Fusarium xyrophilum with other microorganisms and insects in a putative floral mimicry system | Terry Torres Cruz

Terry Torres Cruz, a dual-title PhD candidate in Plant Pathology and Biogeochemistry, shares some of her dissertation research on Fusarium xyrophium and its interactions with insects and other…

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2021 NOV 05 Species-specific effects and fungal associations of trees alter soil microbiome structure and function

Caylon Yates, Graduate Student, Penn State

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2021 OCT 15 How do microbial communities respond to perturbations?

Daniel Amor, Massachusetts Institute of Technology

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EarthTalks 2021-10-11: Alejandra Domic

Zoom Recording ID: 767635597 UUID: ja4U4w3PRu6WKxeMvyeixg== Meeting Time: 2021-10-11 11:33:50pm

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2019 SEPT 20 Know your enemy before you go to war: a story of bacterial blotch of mushroom

Samuel Martins, Penn State

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2019 DEC 13 From Neanderthals to artic ice: what ancient microbial communities can tell us

Laura Weyrich, Penn State

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2020 FEB 28 Gut microbiome in relation to autoimmunity and Type 1 Diabetes

Tommi Vatanen, University of Auckland

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Faculty Research Spotlight Edwin Sabuhoro from RPTM

The Virunga Landscape in Africa (Uganda, Rwanda, and the Democratic Republic of the Congo) is home to the world’s last remaining population of Mountain Gorillas and many other unique wildlife…

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2020 THIRD PLACE Role of mycorrhizal association in microbial adaptation

Caylon Yates, Graduate Student, Penn State

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2020 OCT 30 Towards a distributed framework for microbial ecophylogenomics

Jon Sanders, Ph.D., Cornell University

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