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Dr Tim McAllister, Principal Research Scientist at Agriculture and Agi-Food Canada talked about his comprehensive tracking of antimicrobial resistance (AMR) genes across systems, risk assessment, and…
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Academic Research
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PhD Student and NSF Graduate Research Fellow, Max Aleman, presented his research focused on diseased mushroom microbial biomarker, as well as how pathogen-induced changes in plant metabolite…
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Academic Research
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Dr. Roman-Reyna, who started the lab at Penn State in Fall 2023, introduced her research goals and experience, including her vast work with different metagenomic sequencing methods and analyses. A…
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Academic Research
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Dr. Garcia-Pichel speaks about his research on biocrusts and restoration efforts, include his discovery of a predatory bacterium that can kill cyanobacteria – the primary component of…
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Academic Research
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Dr. Laforest-Lapointe presents her work on plant and human microbial ecology, with a focus on spatial dynamics and microbiome assembly in early life. The One Health Microbiome Center at Penn State…
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Academic Research
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Dr. Alejandro Reyes Muños, Profesor Asociado and Director of the Biología Computacional y Ecología Microbiana (BCEM) at the Universidad de los Andes in Colombia, presents his…
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Academic Research
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Full title: The ocean as a treasure trove for novel taxa, enzymes and bioactive compounds.
Dr. Shinichi Sunagawa, a professor at ETH Zürich presents his groundbreaking associated with the…
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Academic Research
Zoom Recording Open Educational Resources (OER)
OER
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Full title: The species-specific impact of airway Prevotella on infection resilience in the lung.
Dr. Sarah Clark, an Assistant Professor of Otolaryngology – Head and Neck Surgery, talks…
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Academic Research
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Zoom Recording ID: 8575072405
UUID: d3vTbpGPRiqc2yTLt66L3A==
Meeting Time: 2023-02-01 08:17:26pmGMT
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Dr. Joan Roughgarden talks about a new mathematical model developed to understand phage-bacteria dynamics. The follow-up Q&A is included in this video. Penn State’s Microbiome Center…
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Academic Research
Web Conference Recording
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Metatranscriptomics presents a wickedly hard problem when analyzed by high throughput sequencing because of the many moving parts: the abundance and occurrence of different species can vary along…
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Direct YouTube video link: https://youtu.be/dJ5z2SRwzgs Explanation of distance measurement between data points and a simple use of hierarchical clustering in the Orange workflow.
License: GNU…
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Direct YouTube video link: https://youtu.be/lb-x36xqJ-E Creating a data analysis workflow in Orange data mining software.
License: GNU GPL + CC
Music by: http://www.bensound.com/
Website:…
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Max Aleman, a PhD candidate in Plant Pathology and Environmental Microbiology, shares a current research project on the metagenome in mushroom blotch disease. Penn State’s Microbiome Center…
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