Search for tag: "microbiome"

43 Media

Materials-Enabled Strategies for Studying and… duration 55 minutes 31 seconds Materials-Enabled Strategies for Studying and… Materials-Enabled Strategies for Studying and Manipulating the Gut Microbiome \| Scott Medina, PhD, Penn State	Materials-Enabled Strategies for Studying and Manipulating the Gut Microbiome \| Scott Medina, PhD, Penn State Dr. Scott Medina shared his work on developing a synthetic mucus for improving microbiome research models and hydrogel capsules for delivering live beneficial microbes. The One Health Microbiome… biomedical engineering hydrogel mucus microbes biomaterials microbiome material bacteria surface materials capsule coating growth environment proteins bit viscosity fibers model water core idea commensal hours things From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Characterizing bacterial genes with large-scale… duration 1 hour 2 minutes Characterizing bacterial genes with large-scale… Characterizing bacterial genes with large-scale genetics \| Adam Deutschbauer, PhD, LBNL	Characterizing bacterial genes with large-scale genetics \| Adam Deutschbauer, PhD, LBNL Dr. Deutschbauer talks about the he approaches and tools he uses for microbial functional genomics, including Barseq, with a focus on RB-TnSeq and over-expression experiments. The One Health… genomics microbes microbiome sequences bacteria genes assays genome mutants gene things organism lot approach shape expression protein function machine cell fitness lab enrichment library From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
The unseen carbon cycle: Amines to an end \| Kelly… duration 58 minutes 8 seconds The unseen carbon cycle: Amines to an end \| Kelly… The unseen carbon cycle: Amines to an end \| Kelly Wrighton, Colorado State University	The unseen carbon cycle: Amines to an end \| Kelly Wrighton, Colorado State University Dr. Kelly Wrighton take us on a methylated amines journey, from discussing her research on using microbiomes to predict atherosclerotic disease in humans to understanding how microbe could constrain… methane microbiome microbes disease amines lot systems metabolism wetlands space study soils cohort scale gut team substrates carbon question knowledge methanogens compounds From Nichole Ginnan 0 likes 15 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
New Concepts for Defining and Characterizing the… duration 58 minutes 58 seconds New Concepts for Defining and Characterizing the… New Concepts for Defining and Characterizing the Bovine Microactome \| Tim McAllister, PhD	New Concepts for Defining and Characterizing the Bovine Microactome \| Tim McAllister, PhD Dr Tim McAllister, Principal Research Scientist at Agriculture and Agi-Food Canada talked about his comprehensive tracking of antimicrobial resistance (AMR) genes across systems, risk assessment, and… antimicrobials resistance bacteria cows bovine microbes environment genes lot livestock cattle species disease microbiome risk humans islets microbiomes feed production environments things From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Microbial Communities on Host Surfaces: Resource… duration 48 minutes 5 seconds Microbial Communities on Host Surfaces: Resource… Microbial Communities on Host Surfaces: Resource Dynamics & Disease Impact \| Max Aleman, Penn State	Microbial Communities on Host Surfaces: Resource Dynamics & Disease Impact \| Max Aleman, Penn State PhD Student and NSF Graduate Research Fellow, Max Aleman, presented his research focused on diseased mushroom microbial biomarker, as well as how pathogen-induced changes in plant metabolite… bacteria microbes microbiome metabolites plants mushrooms leaf pathogen surface species samples differences communities host peaks level leaves question phenotype control disease growth resources From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Biofilm Signaling and Microbiome-Host Specificity… duration 57 minutes 46 seconds Biofilm Signaling and Microbiome-Host Specificity… Biofilm Signaling and Microbiome-Host Specificity in Vibrio fischeri \| Mark Mandel, PhD, (UW)	Biofilm Signaling and Microbiome-Host Specificity in Vibrio fischeri \| Mark Mandel, PhD, (UW) Dr. Mark Mandel is an Associate Professor of Medical Microbiology and Immunology at the University of Wisconsin - Madison. Dr. Mandel talks about the molecular mechanisms controlling Vibrio fischeri,… bacteria squid biofilm microbiome strain host regulator domain gene question protein lab pathway lot compounds rcs organ fish rscs genes From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Microbiome Analysis as a Surveillance Tool to… duration 39 minutes 24 seconds Microbiome Analysis as a Surveillance Tool to… Microbiome Analysis as a Surveillance Tool to Detect and Track Plant Pathogen Threats \| Veronica Roman-Reyna, PhD	Microbiome Analysis as a Surveillance Tool to Detect and Track Plant Pathogen Threats \| Veronica Roman-Reyna, PhD Dr. Roman-Reyna, who started the lab at Penn State in Fall 2023, introduced her research goals and experience, including her vast work with different metagenomic sequencing methods and analyses. A… microbiome pathology plant pathology and environmental microbiology climate change detection diagnostic idea disease rice diversity analysis bacteria plant plants pathogens trees question genes microbes systems crops approach overview genomes lot species From Nichole Ginnan 0 likes 1 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Dissecting Host-Microbiome Spatial Structure and… duration 57 minutes 43 seconds Dissecting Host-Microbiome Spatial Structure and… Dissecting Host-Microbiome Spatial Structure and Function \| Emmanuel Edem Adade, SUNY Albany	Dissecting Host-Microbiome Spatial Structure and Function \| Emmanuel Edem Adade, SUNY Albany Emmanuel Edem Adade, a PhD Candidate at SUNY Albany, presented his groundbreaking work on visualizing bacterial synthetic communities in a zebrafish model system. Emmanuel's work included using… microbiome microscopy zebrafish microbes bacteria fish host model mucus cells pathogen structures cell models interactions image communities lab flow probes scale question From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Getting to the Root of Host-Microbiome… duration 55 minutes 51 seconds Getting to the Root of Host-Microbiome… Getting to the Root of Host-Microbiome Interactions \| Cara Haney, PhD, University of Pittsburg	Getting to the Root of Host-Microbiome Interactions \| Cara Haney, PhD, University of Pittsburg Dr. Cara Haney presents her cutting-edge research focused on understanding how host plants determine which bacteria are friends and which are foes using a model plant system and diverse strains of… bacteria microbes microbiome plant plants response immunity pathogen pseudomonas mutant growth defense gene lab toxin commensal pathogens strains mutants expression From Nichole Ginnan 0 likes 4 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
The Social Microbiome: Anthropology, Microbes… duration 58 minutes 24 seconds The Social Microbiome: Anthropology, Microbes… The Social Microbiome: Anthropology, Microbes & Cross-disciplinary Collab \| Amber Benezra, PhD	The Social Microbiome: Anthropology, Microbes & Cross-disciplinary Collab \| Amber Benezra, PhD Dr. Amber Benezra is a sociocultural anthropologist researching how studies of the human microbiome intersect with biomedical ethics, public health/technological infrastructures and care. In… anthropology microbiome bangladesh bioethics race things microbes science anthropologists scientists study food lab field mothers water samples microbiomes malnutrition lot paper From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Beyond Normalizations: Incorporating Scale… duration 1 hour 12 minutes Beyond Normalizations: Incorporating Scale… Beyond Normalizations: Incorporating Scale Uncertainty in ALDEx2 \| Michelle Nixon, PhD, Penn State	Beyond Normalizations: Incorporating Scale Uncertainty in ALDEx2 \| Michelle Nixon, PhD, Penn State Dr. Michelle Nixon a member of Dr. Justin Silverman's lab at Penn State University demonstrates how to incorporate scale uncertainty when transforming your microbiome read count data, using… microbiome statistics scale gamma model question samples assumption uncertainty microbes normalization positives abundance condition sample questions sense analysis gut tax function From Nichole Ginnan 0 likes 0 plays 0 Usage Academic Research Training Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Illuminating Metabolomic Dark Matter - Reshaping… duration 58 minutes 39 seconds Illuminating Metabolomic Dark Matter - Reshaping… Illuminating Metabolomic Dark Matter - Reshaping How to Mine and Reuse Big Mass Spectrometry Data \| Mingxun Wang, PhD, UC Riverside	Illuminating Metabolomic Dark Matter - Reshaping How to Mine and Reuse Big Mass Spectrometry Data \| Mingxun Wang, PhD, UC Riverside Dr. Mingxun Wang talks about his groundbreaking metabolomics research and how to extract novel findings from Mass Spec data. The One Health Microbiome Center at Penn State optimizes,… metabolites microbiome things molecules molecule lot question mass structure knowledge compounds side chemical spectrum modification thing chemists hand effort libraries point From Nichole Ginnan 0 likes 1 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Heterotroph/Phototroph Interactions and Community… duration 57 minutes 56 seconds Heterotroph/Phototroph Interactions and Community… Heterotroph/Phototroph Interactions and Community Assembly in Biocrust Microbiomes \| Ferran Garcia-Pichel, PhD, Arizona State Univ.	Heterotroph/Phototroph Interactions and Community Assembly in Biocrust Microbiomes \| Ferran Garcia-Pichel, PhD, Arizona State Univ. Dr. Garcia-Pichel speaks about his research on biocrusts and restoration efforts, include his discovery of a predatory bacterium that can kill cyanobacteria – the primary component of… zoom biocrust microbiome microbiology ecology soil crust bacteria bit nitrogen lot species things pathogen restoration culture question thing cell isolates growth microbes sinus From Nichole Ginnan 0 likes 5 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Host-Microbe Interactions in the Anthropocene \|… duration 57 minutes 54 seconds Host-Microbe Interactions in the Anthropocene \|… Host-Microbe Interactions in the Anthropocene \| Isabelle Laforest-Lapointe, PhD, Université de Sherbrooke	Host-Microbe Interactions in the Anthropocene \| Isabelle Laforest-Lapointe, PhD, Université de Sherbrooke Dr. Laforest-Lapointe presents her work on plant and human microbial ecology, with a focus on spatial dynamics and microbiome assembly in early life. The One Health Microbiome Center at Penn State… plants human microbiome forest sweetener species diversity plant bacteria microbes productivity fungi maple environment impact host leaf question trees interactions microbe ecosystem communities tree composition From Nichole Ginnan 0 likes 10 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Leveraging Fermented Food Microbiomes for… duration 55 minutes 46 seconds Leveraging Fermented Food Microbiomes for… Leveraging Fermented Food Microbiomes for Sustainable Food Production \| Josephine Wee, PhD, Penn State	Leveraging Fermented Food Microbiomes for Sustainable Food Production \| Josephine Wee, PhD, Penn State Dr. Josephine Wee talks about various projects focused on understand sour dough bread microbiomes and how they can be leveraged to improve the quality and shelf life of bread, as well as potentially… zoom bread food safety microbiome food sourdough gluten question dough yeast communities microbiomes bacteria samples structure diversity function breads lot fungi lab microbes From Nichole Ginnan 0 likes 17 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER
Navigating the Complexities of Science… duration 57 minutes 34 seconds Navigating the Complexities of Science… Navigating the Complexities of Science Communication \| Kristina Campbell, Science and Medical Writer	Navigating the Complexities of Science Communication \| Kristina Campbell, Science and Medical Writer Kristina Campbell, a science and medical writer, talks about how to effectively communicate science, particularly microbiome science. The One Health Microbiome Center at Penn State optimizes,… microbiome science communications narrative narratives communication things thing lot point scientists media microbes head misinformation awareness ways microbe concept expert person From Nichole Ginnan 0 likes 6 plays 0 Usage Academic Research Zoom Recording Creative Commons None (All Rights Reserved) Open Educational Resources (OER) OER